Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
UPK1BO75841 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
UPK1BO75841 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK1BO75841 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK1BO75841 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK1BO75841 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK1BO75841 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UPK1BO75841 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK1BO75841 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UPK1BO75841 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.76□□□□□ -0.37
UPK1BO75841 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK1BO75841 AC073862.5-201ENST00000624129 2027 ntBASIC12.76□□□□□ -0.37
UPK1BO75841 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
UPK1BO75841 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
UPK1BO75841 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 AC142381.1-201ENST00000426099 345 ntBASIC12.75□□□□□ -0.37
UPK1BO75841 HIST3H2BA-201ENST00000436555 524 ntBASIC12.75□□□□□ -0.37
UPK1BO75841 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK1BO75841 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK1BO75841 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK1BO75841 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 OR7E14P-202ENST00000530490 1290 ntBASIC12.75□□□□□ -0.37
UPK1BO75841 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.75□□□□□ -0.37
UPK1BO75841 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK1BO75841 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 AC015688.4-201ENST00000580780 1647 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms