Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SSSCA1O60232 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.03□□□□□ -0.48
SSSCA1O60232 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ALG1L5P-201ENST00000482043 771 ntBASIC12.03□□□□□ -0.48
SSSCA1O60232 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.03□□□□□ -0.48
SSSCA1O60232 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.03□□□□□ -0.48
SSSCA1O60232 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 AC040169.1-201ENST00000565382 521 ntBASIC12.03□□□□□ -0.48
SSSCA1O60232 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.03□□□□□ -0.48
SSSCA1O60232 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
SSSCA1O60232 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 AC093525.8-201ENST00000624099 1342 ntBASIC12.03□□□□□ -0.48
SSSCA1O60232 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SSSCA1O60232 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.02□□□□□ -0.48
SSSCA1O60232 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSSCA1O60232 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSSCA1O60232 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSSCA1O60232 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSSCA1O60232 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.02□□□□□ -0.48
SSSCA1O60232 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSSCA1O60232 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSSCA1O60232 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
SSSCA1O60232 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
SSSCA1O60232 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSSCA1O60232 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
SSSCA1O60232 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.02□□□□□ -0.49
SSSCA1O60232 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SSSCA1O60232 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.02□□□□□ -0.49
SSSCA1O60232 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SSSCA1O60232 RPL37AP1-201ENST00000412502 279 ntBASIC12.02□□□□□ -0.49
SSSCA1O60232 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.02□□□□□ -0.49
SSSCA1O60232 GPS2P2-201ENST00000430745 888 ntBASIC12.02□□□□□ -0.49
SSSCA1O60232 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.02□□□□□ -0.49
SSSCA1O60232 RN7SL618P-201ENST00000477850 296 ntBASIC12.02□□□□□ -0.49
SSSCA1O60232 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.02□□□□□ -0.49
SSSCA1O60232 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.02□□□□□ -0.49
SSSCA1O60232 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.02□□□□□ -0.49
SSSCA1O60232 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.02□□□□□ -0.49
SSSCA1O60232 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.02□□□□□ -0.49
SSSCA1O60232 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SSSCA1O60232 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.02□□□□□ -0.49
SSSCA1O60232 AC092364.2-202ENST00000597012 1073 ntBASIC12.02□□□□□ -0.49
SSSCA1O60232 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 MIR6074-201ENST00000612054 107 ntBASIC12.02□□□□□ -0.49
SSSCA1O60232 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.02□□□□□ -0.49
SSSCA1O60232 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
SSSCA1O60232 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SSSCA1O60232 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SSSCA1O60232 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.02□□□□□ -0.49
SSSCA1O60232 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.02□□□□□ -0.49
SSSCA1O60232 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSSCA1O60232 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms