Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.07□□□□□ -0.64
SNAI2O43623 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.07□□□□□ -0.64
SNAI2O43623 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
SNAI2O43623 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
SNAI2O43623 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
SNAI2O43623 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
SNAI2O43623 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.07□□□□□ -0.64
SNAI2O43623 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
SNAI2O43623 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.07□□□□□ -0.64
SNAI2O43623 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.07□□□□□ -0.64
SNAI2O43623 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.07□□□□□ -0.64
SNAI2O43623 LINC01115-203ENST00000606068 577 ntBASIC11.07□□□□□ -0.64
SNAI2O43623 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.07□□□□□ -0.64
SNAI2O43623 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
SNAI2O43623 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SNAI2O43623 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 ELL2P1-201ENST00000413990 1906 ntBASIC11.07□□□□□ -0.64
SNAI2O43623 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SNAI2O43623 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.07□□□□□ -0.64
SNAI2O43623 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 AL591122.2-201ENST00000624125 1853 ntBASIC11.06□□□□□ -0.64
SNAI2O43623 INE2-201ENST00000630399 1874 ntBASIC11.06□□□□□ -0.64
SNAI2O43623 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.06□□□□□ -0.64
SNAI2O43623 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.06□□□□□ -0.64
SNAI2O43623 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
SNAI2O43623 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.06□□□□□ -0.64
SNAI2O43623 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.06□□□□□ -0.64
SNAI2O43623 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.06□□□□□ -0.64
SNAI2O43623 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.06□□□□□ -0.64
SNAI2O43623 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.06□□□□□ -0.64
SNAI2O43623 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.06□□□□□ -0.64
SNAI2O43623 MTDHP5-201ENST00000598980 586 ntBASIC11.06□□□□□ -0.64
SNAI2O43623 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.06□□□□□ -0.64
SNAI2O43623 AL513210.1-201ENST00000629608 234 ntBASIC11.06□□□□□ -0.64
SNAI2O43623 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.06□□□□□ -0.64
SNAI2O43623 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.06□□□□□ -0.64
SNAI2O43623 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SNAI2O43623 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms