Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL928921.2-201ENST00000641325 2442 ntBASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL359881.3-201ENST00000602640 1721 ntBASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC022447.6-201ENST00000515522 438 ntBASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GPR182-203ENST00000622922 591 ntBASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC006453.4-201ENST00000636949 1252 ntBASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRSS30P-206ENST00000641773 873 ntBASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 BTBD6P1-201ENST00000412176 1267 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms