Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
RNF7Q9UBF6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
RNF7Q9UBF6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
RNF7Q9UBF6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
RNF7Q9UBF6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RNF7Q9UBF6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.39□□□□□ -0.43
RNF7Q9UBF6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 RPSAP36-202ENST00000494591 1261 ntBASIC12.39□□□□□ -0.43
RNF7Q9UBF6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AC091271.1-201ENST00000611877 1162 ntBASIC12.39□□□□□ -0.43
RNF7Q9UBF6 MIR6074-201ENST00000612054 107 ntBASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 AC006504.5-208ENST00000588784 2401 ntBASIC12.39□□□□□ -0.43
RNF7Q9UBF6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RNF7Q9UBF6 ST20-AS1-201ENST00000560255 4223 ntBASIC12.38□□□□□ -0.43
RNF7Q9UBF6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 GOLGA2P4-201ENST00000441462 777 ntBASIC12.38□□□□□ -0.43
RNF7Q9UBF6 HSPB1P2-201ENST00000448722 546 ntBASIC12.38□□□□□ -0.43
RNF7Q9UBF6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 AC021723.1-201ENST00000486306 515 ntBASIC12.38□□□□□ -0.43
RNF7Q9UBF6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.38□□□□□ -0.43
RNF7Q9UBF6 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.38□□□□□ -0.43
RNF7Q9UBF6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms