Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPF3BQ9BZI7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 TMEM14DP-201ENST00000422205 345 ntBASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 ACA64.2-201ENST00000459014 129 ntBASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 AP003171.2-201ENST00000528208 925 ntBASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 RN7SL48P-201ENST00000579283 293 ntBASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
UPF3BQ9BZI7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 FTLP10-202ENST00000505798 471 ntBASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 KHSRPP1-201ENST00000427983 1768 ntBASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 BEND3P1-201ENST00000421591 1944 ntBASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF3BQ9BZI7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 AC079781.5-202ENST00000641784 3743 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms