Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 EIF3FP3-201ENST00000434851 1086 ntBASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AC006453.4-201ENST00000636949 1252 ntBASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 BEND3P1-201ENST00000421591 1944 ntBASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AL360270.3-201ENST00000609118 1348 ntBASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 ACE3P-201ENST00000423435 1973 ntBASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 FAM86MP-201ENST00000340703 885 ntBASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AC245100.3-201ENST00000441281 285 ntBASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RN7SL560P-201ENST00000577943 264 ntBASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 MIR4741-201ENST00000579822 90 ntBASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 CICP17-201ENST00000418553 2377 ntBASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCGF1Q9BSM1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms