Protein–RNA interactions for Protein: Q92903

CDS1, Phosphatidate cytidylyltransferase 1, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1Q92903 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CDS1Q92903 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.69□□□□□ -0.22
CDS1Q92903 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDS1Q92903 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDS1Q92903 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDS1Q92903 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDS1Q92903 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 AC006001.1-201ENST00000325130 474 ntBASIC13.68□□□□□ -0.22
CDS1Q92903 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 ARSEP1-201ENST00000420443 635 ntBASIC13.68□□□□□ -0.22
CDS1Q92903 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.68□□□□□ -0.22
CDS1Q92903 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.68□□□□□ -0.22
CDS1Q92903 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.68□□□□□ -0.22
CDS1Q92903 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CDS1Q92903 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CDS1Q92903 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CDS1Q92903 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDS1Q92903 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.68□□□□□ -0.22
CDS1Q92903 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDS1Q92903 KRT8P4-201ENST00000509735 1454 ntBASIC13.67□□□□□ -0.22
CDS1Q92903 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CDS1Q92903 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.67□□□□□ -0.22
CDS1Q92903 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.67□□□□□ -0.22
CDS1Q92903 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.67□□□□□ -0.22
CDS1Q92903 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDS1Q92903 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDS1Q92903 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDS1Q92903 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.67□□□□□ -0.22
CDS1Q92903 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.67□□□□□ -0.22
CDS1Q92903 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.67□□□□□ -0.22
CDS1Q92903 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDS1Q92903 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 CR383656.12-201ENST00000549567 513 ntBASIC13.67□□□□□ -0.22
CDS1Q92903 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.67□□□□□ -0.22
CDS1Q92903 RHOXF1P1-202ENST00000635473 501 ntBASIC13.67□□□□□ -0.22
CDS1Q92903 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.67□□□□□ -0.22
CDS1Q92903 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 PDIA3P1-201ENST00000471856 1510 ntBASIC13.67□□□□□ -0.22
CDS1Q92903 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDS1Q92903 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms