Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 AL121912.1-201ENST00000603683 238 ntBASIC12.99□□□□□ -0.33
AP3S1Q92572 MIR6069-201ENST00000620069 79 ntBASIC12.99□□□□□ -0.33
AP3S1Q92572 AC148477.8-201ENST00000624298 468 ntBASIC12.99□□□□□ -0.33
AP3S1Q92572 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S1Q92572 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S1Q92572 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
AP3S1Q92572 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
AP3S1Q92572 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S1Q92572 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.98□□□□□ -0.33
AP3S1Q92572 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 KRT8P14-201ENST00000414254 1442 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
AP3S1Q92572 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S1Q92572 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
AP3S1Q92572 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.98□□□□□ -0.33
AP3S1Q92572 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 AC136604.1-202ENST00000425471 771 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 SPCS2P4-201ENST00000436160 681 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 SPDYE11-202ENST00000450699 704 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 AC093909.1-201ENST00000504731 1122 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.98□□□□□ -0.33
AP3S1Q92572 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 SPDYE9P-201ENST00000570642 692 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.98□□□□□ -0.33
AP3S1Q92572 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
AP3S1Q92572 SPDYE10P-202ENST00000612005 668 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 SPDYE8P-202ENST00000612377 668 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S1Q92572 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 MAPK10-262ENST00000641051 5738 ntBASIC12.98□□□□□ -0.33
AP3S1Q92572 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
AP3S1Q92572 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S1Q92572 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S1Q92572 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.97□□□□□ -0.33
AP3S1Q92572 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AP3S1Q92572 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
AP3S1Q92572 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
AP3S1Q92572 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S1Q92572 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
AP3S1Q92572 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AP3S1Q92572 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
AP3S1Q92572 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms