Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
CDC42BPAQ5VT25 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 SSR4-202ENST00000370085 526 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 GOLGA6L16P-201ENST00000441780 1299 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AC092896.1-201ENST00000465850 380 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 RN7SL128P-201ENST00000467883 305 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AC132825.4-202ENST00000578792 434 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AC104640.1-201ENST00000562617 2109 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 FGD5P1-202ENST00000614866 2498 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 TUBB8P4-201ENST00000511806 1324 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 RPL13AP3-202ENST00000494676 1473 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 RN7SL288P-201ENST00000490496 291 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 TYMSP2-201ENST00000589501 424 ntBASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPAQ5VT25 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 PES1P2-201ENST00000449745 1735 ntBASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 GGTLC4P-201ENST00000402176 664 ntBASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 OR51A9P-201ENST00000422578 911 ntBASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPAQ5VT25 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 RN7SL351P-201ENST00000469306 248 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 AL627230.2-201ENST00000613254 655 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms