Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 USP32P1-208ENST00000506594 1164 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 SLC25A47P1-201ENST00000531577 414 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 HILS1-202ENST00000545329 423 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 RAB43P1-201ENST00000561790 589 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AC106886.1-201ENST00000568660 600 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 BTNL10-201ENST00000595971 695 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AC087386.2-201ENST00000623212 4637 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AC114271.1-201ENST00000612689 2813 ntBASIC14.44□□□□□ -0.1
SFT2D3Q587I9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AL118506.1-201ENST00000601296 3082 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 FAM90A12P-201ENST00000519497 2375 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 FAM90A24P-201ENST00000520792 2369 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC112492.5-201ENST00000421897 457 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC093433.1-201ENST00000458048 571 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC068587.3-201ENST00000526613 355 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC233724.13-201ENST00000598383 410 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms