Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 AC098614.1-201ENST00000368528 745 ntBASIC14.19□□□□□ -0.14
HMGCS1Q01581 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 RN7SL692P-201ENST00000464677 288 ntBASIC14.19□□□□□ -0.14
HMGCS1Q01581 FTLP10-202ENST00000505798 471 ntBASIC14.19□□□□□ -0.14
HMGCS1Q01581 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 AL596325.1-201ENST00000563991 1082 ntBASIC14.19□□□□□ -0.14
HMGCS1Q01581 RN7SL48P-201ENST00000579283 293 ntBASIC14.19□□□□□ -0.14
HMGCS1Q01581 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 AP001002.3-201ENST00000623482 206 ntBASIC14.19□□□□□ -0.14
HMGCS1Q01581 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
HMGCS1Q01581 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCS1Q01581 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AL359881.3-201ENST00000602640 1721 ntBASIC14.18□□□□□ -0.14
HMGCS1Q01581 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AC089987.1-201ENST00000551654 2209 ntBASIC14.18□□□□□ -0.14
HMGCS1Q01581 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AP006294.1-201ENST00000415407 339 ntBASIC14.18□□□□□ -0.14
HMGCS1Q01581 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 ECM1P1-201ENST00000604092 1279 ntBASIC14.18□□□□□ -0.14
HMGCS1Q01581 MIR6074-201ENST00000612054 107 ntBASIC14.18□□□□□ -0.14
HMGCS1Q01581 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 KHSRPP1-201ENST00000427983 1768 ntBASIC14.18□□□□□ -0.14
HMGCS1Q01581 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCS1Q01581 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCS1Q01581 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms