Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H6P61129 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.28■□□□□ 0.68
ZC3H6P61129 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZC3H6P61129 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.28■□□□□ 0.68
ZC3H6P61129 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.28■□□□□ 0.68
ZC3H6P61129 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.28■□□□□ 0.68
ZC3H6P61129 KRT18P46-201ENST00000435568 1279 ntBASIC19.28■□□□□ 0.68
ZC3H6P61129 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.28■□□□□ 0.68
ZC3H6P61129 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC19.28■□□□□ 0.68
ZC3H6P61129 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.28■□□□□ 0.68
ZC3H6P61129 TRMT112P3-201ENST00000580149 358 ntBASIC19.28■□□□□ 0.68
ZC3H6P61129 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.28■□□□□ 0.68
ZC3H6P61129 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.28■□□□□ 0.68
ZC3H6P61129 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZC3H6P61129 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZC3H6P61129 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZC3H6P61129 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.28■□□□□ 0.68
ZC3H6P61129 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H6P61129 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ZC3H6P61129 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZC3H6P61129 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 AC063952.3-201ENST00000467756 308 ntBASIC19.27■□□□□ 0.68
ZC3H6P61129 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.27■□□□□ 0.68
ZC3H6P61129 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.27■□□□□ 0.68
ZC3H6P61129 ABHD17AP9-201ENST00000561925 548 ntBASIC19.27■□□□□ 0.68
ZC3H6P61129 AC027139.1-201ENST00000565286 951 ntBASIC19.27■□□□□ 0.68
ZC3H6P61129 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 MIR6746-201ENST00000620971 63 ntBASIC19.27■□□□□ 0.68
ZC3H6P61129 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ZC3H6P61129 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H6P61129 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H6P61129 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ZC3H6P61129 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.27■□□□□ 0.67
ZC3H6P61129 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ZC3H6P61129 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.27■□□□□ 0.67
ZC3H6P61129 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.27■□□□□ 0.67
ZC3H6P61129 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
ZC3H6P61129 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H6P61129 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.26■□□□□ 0.67
ZC3H6P61129 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZC3H6P61129 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
ZC3H6P61129 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC19.26■□□□□ 0.67
ZC3H6P61129 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ZC3H6P61129 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H6P61129 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ZC3H6P61129 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.26■□□□□ 0.67
ZC3H6P61129 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H6P61129 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.26■□□□□ 0.67
ZC3H6P61129 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H6P61129 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.26■□□□□ 0.67
ZC3H6P61129 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.26■□□□□ 0.67
ZC3H6P61129 IGHV1-12-201ENST00000518307 205 ntBASIC19.26■□□□□ 0.67
ZC3H6P61129 KRT8P2-201ENST00000556193 944 ntBASIC19.26■□□□□ 0.67
ZC3H6P61129 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms