Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
WNT3AP56704 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.84□□□□□ -0.03
WNT3AP56704 AC100850.1-201ENST00000506768 649 ntBASIC14.84□□□□□ -0.03
WNT3AP56704 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
WNT3AP56704 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.84□□□□□ -0.03
WNT3AP56704 AP005482.1-201ENST00000563722 1273 ntBASIC14.84□□□□□ -0.03
WNT3AP56704 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3AP56704 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 AC133552.6-201ENST00000613406 534 ntBASIC14.84□□□□□ -0.03
WNT3AP56704 COX11-210ENST00000639671 696 ntBASIC14.84□□□□□ -0.03
WNT3AP56704 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3AP56704 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
WNT3AP56704 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3AP56704 E2F3P2-201ENST00000447755 1422 ntBASIC14.83□□□□□ -0.03
WNT3AP56704 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
WNT3AP56704 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
WNT3AP56704 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
WNT3AP56704 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.83□□□□□ -0.03
WNT3AP56704 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.83□□□□□ -0.04
WNT3AP56704 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
WNT3AP56704 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.83□□□□□ -0.04
WNT3AP56704 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.83□□□□□ -0.04
WNT3AP56704 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.83□□□□□ -0.04
WNT3AP56704 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.83□□□□□ -0.04
WNT3AP56704 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.83□□□□□ -0.04
WNT3AP56704 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.83□□□□□ -0.04
WNT3AP56704 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.83□□□□□ -0.04
WNT3AP56704 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.83□□□□□ -0.04
WNT3AP56704 AC027237.1-201ENST00000560942 655 ntBASIC14.83□□□□□ -0.04
WNT3AP56704 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 MIR4259-201ENST00000584466 101 ntBASIC14.83□□□□□ -0.04
WNT3AP56704 AC017083.2-201ENST00000608069 979 ntBASIC14.83□□□□□ -0.04
WNT3AP56704 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.83□□□□□ -0.04
WNT3AP56704 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
WNT3AP56704 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.83□□□□□ -0.04
WNT3AP56704 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
WNT3AP56704 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.83□□□□□ -0.04
WNT3AP56704 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
WNT3AP56704 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3AP56704 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.83□□□□□ -0.04
WNT3AP56704 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 AC020910.6-201ENST00000623084 1459 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
WNT3AP56704 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
WNT3AP56704 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.82□□□□□ -0.04
WNT3AP56704 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
WNT3AP56704 MIR658-201ENST00000385210 100 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.82□□□□□ -0.04
WNT3AP56704 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.82□□□□□ -0.04
WNT3AP56704 YBX1P6-201ENST00000442962 1002 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
WNT3AP56704 KRT223P-202ENST00000449164 1292 ntBASIC14.82□□□□□ -0.04
WNT3AP56704 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.82□□□□□ -0.04
WNT3AP56704 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms