Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCD3P28288 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCD3P28288 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCD3P28288 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 FAM8A2P-201ENST00000528813 1142 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCD3P28288 AC005730.2-201ENST00000564549 1184 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 MIR6720-201ENST00000611664 98 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 AC009093.10-201ENST00000641956 1442 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCD3P28288 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 OR2I1P-210ENST00000642037 4691 ntBASIC13.54□□□□□ -0.24
ABCD3P28288 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCD3P28288 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ABCD3P28288 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ABCD3P28288 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ABCD3P28288 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
ABCD3P28288 FAM86MP-201ENST00000340703 885 ntBASIC13.54□□□□□ -0.24
ABCD3P28288 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCD3P28288 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCD3P28288 POM121L10P-201ENST00000436994 1285 ntBASIC13.54□□□□□ -0.24
ABCD3P28288 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCD3P28288 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 AC021723.1-201ENST00000486306 515 ntBASIC13.54□□□□□ -0.24
ABCD3P28288 AC108725.1-201ENST00000495472 409 ntBASIC13.54□□□□□ -0.24
ABCD3P28288 AC092658.1-201ENST00000505836 891 ntBASIC13.54□□□□□ -0.24
ABCD3P28288 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCD3P28288 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
ABCD3P28288 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCD3P28288 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCD3P28288 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCD3P28288 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ABCD3P28288 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCD3P28288 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ABCD3P28288 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCD3P28288 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCD3P28288 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.53□□□□□ -0.24
ABCD3P28288 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCD3P28288 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCD3P28288 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms