Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 DGCR9-201ENST00000609630 2415 ntBASIC13.82□□□□□ -0.2
CHMP24386 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 AL158070.2-201ENST00000623713 1621 ntBASIC13.82□□□□□ -0.2
CHMP24386 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 MSTO2P-201ENST00000314835 1709 ntBASIC13.81□□□□□ -0.2
CHMP24386 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 AC016694.1-201ENST00000434179 700 ntBASIC13.81□□□□□ -0.2
CHMP24386 AC022210.1-201ENST00000449856 793 ntBASIC13.81□□□□□ -0.2
CHMP24386 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CHMP24386 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.81□□□□□ -0.2
CHMP24386 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.81□□□□□ -0.2
CHMP24386 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.81□□□□□ -0.2
CHMP24386 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.81□□□□□ -0.2
CHMP24386 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CHMP24386 AL603764.1-201ENST00000636452 321 ntBASIC13.81□□□□□ -0.2
CHMP24386 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 AGGF1P1-201ENST00000509500 2073 ntBASIC13.81□□□□□ -0.2
CHMP24386 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.81□□□□□ -0.2
CHMP24386 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHMP24386 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.81□□□□□ -0.2
CHMP24386 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.81□□□□□ -0.2
CHMP24386 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.8□□□□□ -0.2
CHMP24386 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CHMP24386 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
CHMP24386 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 RNU1-114P-201ENST00000365297 166 ntBASIC13.8□□□□□ -0.2
CHMP24386 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.8□□□□□ -0.2
CHMP24386 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 C2orf27AP3-201ENST00000434123 579 ntBASIC13.8□□□□□ -0.2
CHMP24386 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHMP24386 AC104989.1-201ENST00000519711 778 ntBASIC13.8□□□□□ -0.2
CHMP24386 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.8□□□□□ -0.2
CHMP24386 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 AC133552.6-201ENST00000613406 534 ntBASIC13.8□□□□□ -0.2
CHMP24386 AL354718.3-201ENST00000616414 581 ntBASIC13.8□□□□□ -0.2
CHMP24386 CR382287.1-201ENST00000623954 586 ntBASIC13.8□□□□□ -0.2
CHMP24386 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms