Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 SRD5A3P1-201ENST00000603021 949 ntBASIC14.8□□□□□ -0.04
KRT4P19013 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT4P19013 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
KRT4P19013 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KRT4P19013 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 AL031595.1-201ENST00000623969 4709 ntBASIC14.8□□□□□ -0.04
KRT4P19013 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT4P19013 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
KRT4P19013 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT4P19013 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
KRT4P19013 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT4P19013 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KRT4P19013 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KRT4P19013 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT4P19013 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT4P19013 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 BX842568.4-201ENST00000421222 227 ntBASIC14.79□□□□□ -0.04
KRT4P19013 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.79□□□□□ -0.04
KRT4P19013 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.79□□□□□ -0.04
KRT4P19013 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 AP006288.1-201ENST00000446065 395 ntBASIC14.79□□□□□ -0.04
KRT4P19013 AC009477.1-201ENST00000452936 217 ntBASIC14.79□□□□□ -0.04
KRT4P19013 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KRT4P19013 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 AC097493.3-201ENST00000509725 367 ntBASIC14.79□□□□□ -0.04
KRT4P19013 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.79□□□□□ -0.04
KRT4P19013 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
KRT4P19013 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.79□□□□□ -0.04
KRT4P19013 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
KRT4P19013 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 RARRES2P5-201ENST00000564013 466 ntBASIC14.79□□□□□ -0.04
KRT4P19013 SNHG9-202ENST00000564014 471 ntBASIC14.79□□□□□ -0.04
KRT4P19013 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KRT4P19013 AC138761.1-201ENST00000584393 385 ntBASIC14.79□□□□□ -0.04
KRT4P19013 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.79□□□□□ -0.04
KRT4P19013 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT4P19013 AL591122.2-201ENST00000624125 1853 ntBASIC14.79□□□□□ -0.04
KRT4P19013 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT4P19013 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT4P19013 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT4P19013 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT4P19013 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT4P19013 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
KRT4P19013 MIR497HG-202ENST00000572453 3838 ntBASIC14.78□□□□□ -0.04
KRT4P19013 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT4P19013 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KRT4P19013 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms