Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
SFTPBP07988 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 VDAC1P7-201ENST00000462417 847 ntBASIC12.88□□□□□ -0.35
SFTPBP07988 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.88□□□□□ -0.35
SFTPBP07988 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.88□□□□□ -0.35
SFTPBP07988 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.88□□□□□ -0.35
SFTPBP07988 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 WFDC1-204ENST00000613603 549 ntBASIC12.88□□□□□ -0.35
SFTPBP07988 IGHV3-72-202ENST00000621503 303 ntBASIC12.88□□□□□ -0.35
SFTPBP07988 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SFTPBP07988 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SFTPBP07988 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SFTPBP07988 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SFTPBP07988 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SFTPBP07988 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SFTPBP07988 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
SFTPBP07988 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SFTPBP07988 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 AL512384.1-201ENST00000406683 331 ntBASIC12.87□□□□□ -0.35
SFTPBP07988 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.87□□□□□ -0.35
SFTPBP07988 AC011495.1-201ENST00000498085 584 ntBASIC12.87□□□□□ -0.35
SFTPBP07988 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.87□□□□□ -0.35
SFTPBP07988 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.87□□□□□ -0.35
SFTPBP07988 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.87□□□□□ -0.35
SFTPBP07988 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.87□□□□□ -0.35
SFTPBP07988 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.87□□□□□ -0.35
SFTPBP07988 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SFTPBP07988 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.87□□□□□ -0.35
SFTPBP07988 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms