Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
CD4P01730 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 MARK2P16-201ENST00000605714 1723 ntBASIC16.11■□□□□ 0.17
CD4P01730 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CD4P01730 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD4P01730 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.1■□□□□ 0.17
CD4P01730 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD4P01730 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 LINC00554-201ENST00000564841 3011 ntBASIC16.1■□□□□ 0.17
CD4P01730 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.1■□□□□ 0.17
CD4P01730 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CD4P01730 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.1■□□□□ 0.17
CD4P01730 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CD4P01730 BAK1P1-201ENST00000317045 636 ntBASIC16.1■□□□□ 0.17
CD4P01730 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CD4P01730 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.1■□□□□ 0.17
CD4P01730 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD4P01730 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.1■□□□□ 0.17
CD4P01730 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.1■□□□□ 0.17
CD4P01730 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.1■□□□□ 0.17
CD4P01730 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.1■□□□□ 0.17
CD4P01730 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.1■□□□□ 0.17
CD4P01730 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.1■□□□□ 0.17
CD4P01730 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 AC104640.1-201ENST00000562617 2109 ntBASIC16.1■□□□□ 0.17
CD4P01730 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD4P01730 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 PCDHA3-202ENST00000532566 4594 ntBASIC16.1■□□□□ 0.17
CD4P01730 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CD4P01730 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CD4P01730 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CD4P01730 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CD4P01730 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.1■□□□□ 0.17
CD4P01730 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD4P01730 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.09■□□□□ 0.17
CD4P01730 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CD4P01730 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.09■□□□□ 0.17
CD4P01730 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.09■□□□□ 0.17
CD4P01730 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.09■□□□□ 0.17
CD4P01730 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.09■□□□□ 0.17
CD4P01730 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.09■□□□□ 0.17
CD4P01730 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.09■□□□□ 0.17
CD4P01730 AC010234.1-201ENST00000494599 870 ntBASIC16.09■□□□□ 0.17
CD4P01730 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.09■□□□□ 0.17
CD4P01730 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.09■□□□□ 0.17
CD4P01730 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.09■□□□□ 0.17
CD4P01730 C2orf69P1-201ENST00000563532 1093 ntBASIC16.09■□□□□ 0.17
CD4P01730 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms