Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXN3O00409 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXN3O00409 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXN3O00409 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXN3O00409 CICP4-201ENST00000447359 2812 ntBASIC15.71■□□□□ 0.11
FOXN3O00409 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXN3O00409 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXN3O00409 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXN3O00409 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.71■□□□□ 0.11
FOXN3O00409 AC026954.1-201ENST00000429771 1293 ntBASIC15.71■□□□□ 0.11
FOXN3O00409 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXN3O00409 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXN3O00409 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXN3O00409 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXN3O00409 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXN3O00409 AC012645.4-201ENST00000610691 1061 ntBASIC15.71■□□□□ 0.11
FOXN3O00409 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXN3O00409 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXN3O00409 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
FOXN3O00409 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
FOXN3O00409 AC010327.5-201ENST00000586923 3061 ntBASIC15.71■□□□□ 0.1
FOXN3O00409 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXN3O00409 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
FOXN3O00409 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.71■□□□□ 0.1
FOXN3O00409 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
FOXN3O00409 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
FOXN3O00409 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 AC009093.10-201ENST00000641956 1442 ntBASIC15.7■□□□□ 0.1
FOXN3O00409 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FOXN3O00409 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 TCAM1P-207ENST00000485295 1537 ntBASIC15.7■□□□□ 0.1
FOXN3O00409 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FOXN3O00409 MIR600HG-201ENST00000449175 5984 ntBASIC15.7■□□□□ 0.1
FOXN3O00409 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXN3O00409 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.7■□□□□ 0.1
FOXN3O00409 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXN3O00409 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXN3O00409 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FOXN3O00409 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXN3O00409 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXN3O00409 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXN3O00409 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
FOXN3O00409 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FOXN3O00409 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXN3O00409 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXN3O00409 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXN3O00409 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXN3O00409 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
FOXN3O00409 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXN3O00409 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms