Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 AC138696.2-201ENST00000607376 223 ntBASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 PEG13-201ENST00000631594 5667 ntBASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 MIR769-201ENST00000390225 118 ntBASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AL662890.1-201ENST00000396818 632 ntBASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AC016700.1-201ENST00000429424 312 ntBASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AC106794.1-201ENST00000506935 792 ntBASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 CICP23-201ENST00000605013 2741 ntBASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA2E9PIF3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 CYP46A4P-201ENST00000414953 267 ntBASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 TUBB8P8-201ENST00000458717 1058 ntBASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA2E9PIF3 AC091544.8-201ENST00000619490 361 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms