Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL139094.1-201ENST00000405549 1188 ntBASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL590640.2-201ENST00000457038 527 ntBASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RPL13AP20-201ENST00000459725 609 ntBASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL138709.1-201ENST00000614840 1693 ntBASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL158070.2-201ENST00000623713 1621 ntBASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DUX4L45-201ENST00000566406 1057 ntBASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RN7SL48P-201ENST00000579283 293 ntBASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ECM1P1-201ENST00000604092 1279 ntBASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MIR6869-201ENST00000619434 62 ntBASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms