Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND2AQ9ULE3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 TSPY25P-201ENST00000429463 745 ntBASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 AC006453.1-201ENST00000636037 1257 ntBASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 FRMPD2B-201ENST00000431305 1347 ntBASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 LINC01165-201ENST00000445190 1623 ntBASIC17.69■□□□□ 0.42
DENND2AQ9ULE3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 RN7SL258P-201ENST00000478664 300 ntBASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 AC124068.2-201ENST00000569473 1109 ntBASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 AC139749.1-202ENST00000617529 3139 ntBASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 AC097359.2-201ENST00000604992 2389 ntBASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 LINC00552-201ENST00000625151 2579 ntBASIC17.68■□□□□ 0.42
DENND2AQ9ULE3 NFIC-211ENST00000641145 8399 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms