Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 TPRX2P-201ENST00000535362 881 ntBASIC13.07□□□□□ -0.32
DUX4Q9UBX2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AL132655.2-201ENST00000596276 594 ntBASIC13.07□□□□□ -0.32
DUX4Q9UBX2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AL591122.2-201ENST00000624125 1853 ntBASIC13.07□□□□□ -0.32
DUX4Q9UBX2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 CES1P1-201ENST00000421606 1704 ntBASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 AL139385.1-201ENST00000611744 3272 ntBASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 CLK3P2-201ENST00000427566 1453 ntBASIC13.06□□□□□ -0.32
DUX4Q9UBX2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 FAM207CP-201ENST00000443486 507 ntBASIC13.06□□□□□ -0.32
DUX4Q9UBX2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 MEIS3P1-201ENST00000495167 958 ntBASIC13.06□□□□□ -0.32
DUX4Q9UBX2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.06□□□□□ -0.32
DUX4Q9UBX2 AC004233.3-201ENST00000607794 1269 ntBASIC13.06□□□□□ -0.32
DUX4Q9UBX2 AL391069.4-201ENST00000609583 481 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms