Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 Z98259.2-201ENST00000641583 609 ntBASIC15.64■□□□□ 0.09
CISHQ9NSE2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CISHQ9NSE2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CISHQ9NSE2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 FAM58BP-201ENST00000439056 645 ntBASIC15.63■□□□□ 0.09
CISHQ9NSE2 AL591846.1-201ENST00000451736 433 ntBASIC15.63■□□□□ 0.09
CISHQ9NSE2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 AC005695.3-201ENST00000614522 232 ntBASIC15.63■□□□□ 0.09
CISHQ9NSE2 AC027601.5-201ENST00000624065 2482 ntBASIC15.63■□□□□ 0.09
CISHQ9NSE2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 AL008718.2-201ENST00000609206 1313 ntBASIC15.63■□□□□ 0.09
CISHQ9NSE2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.63■□□□□ 0.09
CISHQ9NSE2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CISHQ9NSE2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AC152010.1-201ENST00000415779 2006 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AC117489.1-201ENST00000625169 3217 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 MIR600HG-201ENST00000449175 5984 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 AC012441.2-201ENST00000444843 739 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AC104982.3-201ENST00000581995 514 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms