Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AL121992.3-201ENST00000606186 346 ntBASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 DUX4L33-201ENST00000635217 958 ntBASIC13.27□□□□□ -0.29
CHD8Q9HCK8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 LINC02447-202ENST00000501888 2146 ntBASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 RPL30-213ENST00000523172 274 ntTSL 5 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 AL133467.4-201ENST00000602953 725 ntBASIC13.27□□□□□ -0.29
CHD8Q9HCK8 COG6-212ENST00000630730 186 ntTSL 5 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CHD8Q9HCK8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 AC148476.1-201ENST00000622182 705 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 PDXDC2P-206ENST00000534700 1315 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 LILRP2-202ENST00000413572 1383 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 AC022211.2-201ENST00000585075 2527 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms