Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 AL022342.1-201ENST00000400363 863 ntBASIC18.12■□□□□ 0.49
UPF2Q9HAU5 AC125807.1-201ENST00000483097 614 ntBASIC18.12■□□□□ 0.49
UPF2Q9HAU5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 AC069120.2-201ENST00000524091 540 ntBASIC18.12■□□□□ 0.49
UPF2Q9HAU5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 DUX4L47-201ENST00000566374 394 ntBASIC18.12■□□□□ 0.49
UPF2Q9HAU5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF2Q9HAU5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AL139094.1-201ENST00000405549 1188 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AC114501.2-201ENST00000439631 535 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AC022616.1-201ENST00000518688 554 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AC093813.1-201ENST00000605066 256 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 BX539320.1-201ENST00000623759 877 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC18.11■□□□□ 0.49
UPF2Q9HAU5 FAM90A12P-201ENST00000519497 2375 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 FAM90A24P-201ENST00000520792 2369 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 AC111170.3-201ENST00000624282 2464 ntBASIC18.11■□□□□ 0.49
UPF2Q9HAU5 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC004899.2-201ENST00000622993 3860 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 HSPA8P5-201ENST00000456928 2069 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC090643.2-201ENST00000623442 2029 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 AC015688.4-201ENST00000580780 1647 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF2Q9HAU5 KRT8P35-201ENST00000483942 1338 ntBASIC18.1■□□□□ 0.49
UPF2Q9HAU5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms