Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 RNVU1-8-201ENST00000364272 125 ntBASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 GNG10P1-201ENST00000452289 199 ntBASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SCARNA12-201ENST00000459155 270 ntBASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 AC055811.3-201ENST00000584952 686 ntBASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTFDC1Q9BY42 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 AC126177.1-201ENST00000547829 2218 ntBASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 RNA5SP406-201ENST00000516106 112 ntBASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.53■□□□□ 0.4
RTFDC1Q9BY42 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms