Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 TLE1P1-201ENST00000422965 589 ntBASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AC114812.1-204ENST00000449669 728 ntBASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 FO681548.1-201ENST00000455617 1132 ntBASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 GIMAP3P-201ENST00000495150 836 ntBASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AC104596.2-201ENST00000512793 793 ntBASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 RRP7BP-205ENST00000566851 833 ntBASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HDHD3Q9BSH5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
HDHD3Q9BSH5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 CICP20-201ENST00000443330 2801 ntBASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HDHD3Q9BSH5 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms