Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.24□□□□□ -0.61
VGLL1Q99990 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.24□□□□□ -0.61
VGLL1Q99990 AC008738.7-201ENST00000609744 511 ntBASIC11.24□□□□□ -0.61
VGLL1Q99990 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 AC004840.1-201ENST00000636359 365 ntBASIC11.24□□□□□ -0.61
VGLL1Q99990 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
VGLL1Q99990 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 INE2-201ENST00000630399 1874 ntBASIC11.23□□□□□ -0.61
VGLL1Q99990 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
VGLL1Q99990 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 NUS1P3-201ENST00000423502 862 ntBASIC11.23□□□□□ -0.61
VGLL1Q99990 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 RN7SL399P-201ENST00000471648 279 ntBASIC11.23□□□□□ -0.61
VGLL1Q99990 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.23□□□□□ -0.61
VGLL1Q99990 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.23□□□□□ -0.61
VGLL1Q99990 AC093813.1-201ENST00000605066 256 ntBASIC11.23□□□□□ -0.61
VGLL1Q99990 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 BX539320.1-201ENST00000623759 877 ntBASIC11.23□□□□□ -0.61
VGLL1Q99990 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 CICP16-201ENST00000502609 2813 ntBASIC11.23□□□□□ -0.61
VGLL1Q99990 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms