Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.12□□□□□ -0.31
VRK1Q99986 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.12□□□□□ -0.31
VRK1Q99986 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VRK1Q99986 AC244669.2-201ENST00000612320 853 ntBASIC13.12□□□□□ -0.31
VRK1Q99986 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.12□□□□□ -0.31
VRK1Q99986 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.12□□□□□ -0.31
VRK1Q99986 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.12□□□□□ -0.31
VRK1Q99986 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
VRK1Q99986 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.12□□□□□ -0.31
VRK1Q99986 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
VRK1Q99986 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.12□□□□□ -0.31
VRK1Q99986 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 AC093525.8-201ENST00000624099 1342 ntBASIC13.12□□□□□ -0.31
VRK1Q99986 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.12□□□□□ -0.31
VRK1Q99986 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VRK1Q99986 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.12□□□□□ -0.31
VRK1Q99986 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VRK1Q99986 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.11□□□□□ -0.31
VRK1Q99986 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.11□□□□□ -0.31
VRK1Q99986 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.11□□□□□ -0.31
VRK1Q99986 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.11□□□□□ -0.31
VRK1Q99986 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 AC073869.1-201ENST00000415574 2762 ntBASIC13.11□□□□□ -0.31
VRK1Q99986 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.11□□□□□ -0.31
VRK1Q99986 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.11□□□□□ -0.31
VRK1Q99986 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 KRT8P35-201ENST00000483942 1338 ntBASIC13.11□□□□□ -0.31
VRK1Q99986 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VRK1Q99986 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VRK1Q99986 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.11□□□□□ -0.31
VRK1Q99986 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.1□□□□□ -0.31
VRK1Q99986 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
VRK1Q99986 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VRK1Q99986 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms