Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ARID3AQ99856 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ARID3AQ99856 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARID3AQ99856 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.91■□□□□ 0.3
ARID3AQ99856 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.91■□□□□ 0.3
ARID3AQ99856 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
ARID3AQ99856 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.91■□□□□ 0.3
ARID3AQ99856 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.91■□□□□ 0.3
ARID3AQ99856 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ARID3AQ99856 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.91■□□□□ 0.3
ARID3AQ99856 MRPS18AP1-201ENST00000414458 589 ntBASIC16.91■□□□□ 0.3
ARID3AQ99856 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.91■□□□□ 0.3
ARID3AQ99856 RPL13P2-201ENST00000440687 659 ntBASIC16.91■□□□□ 0.3
ARID3AQ99856 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.91■□□□□ 0.3
ARID3AQ99856 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.91■□□□□ 0.3
ARID3AQ99856 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.91■□□□□ 0.3
ARID3AQ99856 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.91■□□□□ 0.3
ARID3AQ99856 AC004790.1-201ENST00000612686 536 ntBASIC16.91■□□□□ 0.3
ARID3AQ99856 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ARID3AQ99856 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
ARID3AQ99856 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.91■□□□□ 0.3
ARID3AQ99856 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARID3AQ99856 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.9■□□□□ 0.3
ARID3AQ99856 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.9■□□□□ 0.3
ARID3AQ99856 UGT1A2P-201ENST00000454886 866 ntBASIC16.9■□□□□ 0.3
ARID3AQ99856 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.9■□□□□ 0.3
ARID3AQ99856 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.9■□□□□ 0.3
ARID3AQ99856 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.9■□□□□ 0.3
ARID3AQ99856 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.9■□□□□ 0.3
ARID3AQ99856 AC004840.1-201ENST00000636359 365 ntBASIC16.9■□□□□ 0.3
ARID3AQ99856 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 USP47-202ENST00000339865 7775 ntTSL 2 BASIC16.9■□□□□ 0.3
ARID3AQ99856 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 AP001267.2-201ENST00000532619 2086 ntBASIC16.9■□□□□ 0.3
ARID3AQ99856 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ARID3AQ99856 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARID3AQ99856 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARID3AQ99856 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.89■□□□□ 0.3
ARID3AQ99856 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms