Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 TPM3P8-201ENST00000330554 643 ntBASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 C2orf27AP3-201ENST00000434123 579 ntBASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 HILS1-202ENST00000545329 423 ntBASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 AC106820.3-201ENST00000561653 397 ntBASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 AL354718.3-201ENST00000616414 581 ntBASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 CR382287.1-201ENST00000623954 586 ntBASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIMC1Q8NDZ2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIMC1Q8NDZ2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms