Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 LINC00265-2P-201ENST00000413372 782 ntBASIC18.04■□□□□ 0.48
COL23A1Q86Y22 STK24P1-201ENST00000455035 1291 ntBASIC18.04■□□□□ 0.48
COL23A1Q86Y22 RN7SL128P-201ENST00000467883 305 ntBASIC18.04■□□□□ 0.48
COL23A1Q86Y22 RPS18P9-201ENST00000482817 460 ntBASIC18.04■□□□□ 0.48
COL23A1Q86Y22 RN7SKP155-201ENST00000516031 288 ntBASIC18.04■□□□□ 0.48
COL23A1Q86Y22 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 DLK1-205ENST00000556051 469 ntTSL 2 BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 CES1P2-201ENST00000566467 1242 ntBASIC18.04■□□□□ 0.48
COL23A1Q86Y22 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 AC015688.4-201ENST00000580780 1647 ntBASIC18.04■□□□□ 0.48
COL23A1Q86Y22 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.04■□□□□ 0.48
COL23A1Q86Y22 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 AC126365.1-201ENST00000578585 1514 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 IFNWP2-201ENST00000431203 580 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 HNRNPA1P2-207ENST00000432375 960 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 AC092903.1-201ENST00000466506 262 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 PRSS3P1-201ENST00000503996 742 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 AC139713.2-207ENST00000641556 1292 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 KRT8P18-201ENST00000413425 1445 ntBASIC18.03■□□□□ 0.48
COL23A1Q86Y22 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL23A1Q86Y22 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 PDXDC2P-206ENST00000534700 1315 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.02■□□□□ 0.48
COL23A1Q86Y22 BX679664.3-201ENST00000414070 555 ntBASIC18.02■□□□□ 0.48
COL23A1Q86Y22 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms