Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 E2F3P2-201ENST00000447755 1422 ntBASIC13.31□□□□□ -0.28
RTL6Q6ICC9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 LINC00528-201ENST00000600723 2160 ntBASIC13.31□□□□□ -0.28
RTL6Q6ICC9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 AC004899.1-201ENST00000424687 1714 ntBASIC13.31□□□□□ -0.28
RTL6Q6ICC9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 UPF3AP2-201ENST00000457924 1132 ntBASIC13.31□□□□□ -0.28
RTL6Q6ICC9 TUBB8P8-201ENST00000458717 1058 ntBASIC13.31□□□□□ -0.28
RTL6Q6ICC9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 RN7SL774P-201ENST00000577467 290 ntBASIC13.31□□□□□ -0.28
RTL6Q6ICC9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 AC005324.6-201ENST00000587972 613 ntBASIC13.31□□□□□ -0.28
RTL6Q6ICC9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RTL6Q6ICC9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 MIR769-201ENST00000390225 118 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AC013355.1-201ENST00000562625 723 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AC100827.2-201ENST00000563214 1194 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 DUX4L46-201ENST00000566845 751 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AC097724.1-201ENST00000609581 426 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AP001505.2-201ENST00000616815 443 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AC068587.8-201ENST00000641239 219 ntBASIC13.3□□□□□ -0.28
RTL6Q6ICC9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTL6Q6ICC9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTL6Q6ICC9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTL6Q6ICC9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RTL6Q6ICC9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTL6Q6ICC9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RTL6Q6ICC9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTL6Q6ICC9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms