Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 AKAP8P1-201ENST00000434743 1349 ntBASIC13.23□□□□□ -0.29
VBP1P61758 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.23□□□□□ -0.29
VBP1P61758 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.23□□□□□ -0.29
VBP1P61758 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.23□□□□□ -0.29
VBP1P61758 AL135744.1-201ENST00000565098 629 ntBASIC13.23□□□□□ -0.29
VBP1P61758 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.23□□□□□ -0.29
VBP1P61758 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
VBP1P61758 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 LINC01711-201ENST00000598340 967 ntBASIC13.23□□□□□ -0.29
VBP1P61758 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.23□□□□□ -0.29
VBP1P61758 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.23□□□□□ -0.29
VBP1P61758 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.23□□□□□ -0.29
VBP1P61758 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.23□□□□□ -0.29
VBP1P61758 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.23□□□□□ -0.29
VBP1P61758 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.23□□□□□ -0.29
VBP1P61758 AP3S2-216ENST00000617003 1561 ntBASIC13.23□□□□□ -0.29
VBP1P61758 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
VBP1P61758 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.23□□□□□ -0.29
VBP1P61758 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.23□□□□□ -0.29
VBP1P61758 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 MKRN5P-201ENST00000445263 1467 ntBASIC13.23□□□□□ -0.29
VBP1P61758 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 AL022323.5-201ENST00000624101 2059 ntBASIC13.22□□□□□ -0.29
VBP1P61758 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 FAM197Y8-203ENST00000450145 560 ntBASIC13.22□□□□□ -0.29
VBP1P61758 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.22□□□□□ -0.29
VBP1P61758 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
VBP1P61758 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.22□□□□□ -0.29
VBP1P61758 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.22□□□□□ -0.29
VBP1P61758 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.22□□□□□ -0.29
VBP1P61758 AL049597.2-201ENST00000565575 961 ntBASIC13.22□□□□□ -0.29
VBP1P61758 AP000842.3-202ENST00000569238 1080 ntBASIC13.22□□□□□ -0.29
VBP1P61758 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.22□□□□□ -0.29
VBP1P61758 AL358472.4-201ENST00000633140 710 ntBASIC13.22□□□□□ -0.29
VBP1P61758 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 TNRC18P1-201ENST00000502875 3650 ntBASIC13.22□□□□□ -0.29
VBP1P61758 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.22□□□□□ -0.29
VBP1P61758 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.22□□□□□ -0.29
VBP1P61758 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VBP1P61758 AL645937.6-201ENST00000641122 3727 ntBASIC13.22□□□□□ -0.29
VBP1P61758 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VBP1P61758 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.21□□□□□ -0.29
VBP1P61758 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms