Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2D3P61077 WDR88-203ENST00000592765 651 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 AC106028.4-201ENST00000614509 607 ntBASIC10.55□□□□□ -0.72
UBE2D3P61077 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D3P61077 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D3P61077 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D3P61077 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2D3P61077 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D3P61077 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2D3P61077 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
UBE2D3P61077 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2D3P61077 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2D3P61077 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D3P61077 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D3P61077 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D3P61077 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 AL118506.1-201ENST00000601296 3082 ntBASIC10.54□□□□□ -0.72
UBE2D3P61077 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
UBE2D3P61077 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D3P61077 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 AC004945.1-201ENST00000416738 983 ntBASIC10.54□□□□□ -0.72
UBE2D3P61077 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.54□□□□□ -0.72
UBE2D3P61077 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 FADS2-205ENST00000517839 469 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D3P61077 AP001582.1-201ENST00000525856 295 ntBASIC10.54□□□□□ -0.72
UBE2D3P61077 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D3P61077 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D3P61077 KRT8P22-201ENST00000562317 1415 ntBASIC10.54□□□□□ -0.72
UBE2D3P61077 SPDYE22P-201ENST00000582158 798 ntBASIC10.54□□□□□ -0.72
UBE2D3P61077 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D3P61077 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D3P61077 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC10.54□□□□□ -0.72
UBE2D3P61077 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.54□□□□□ -0.72
UBE2D3P61077 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D3P61077 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D3P61077 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D3P61077 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms