Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RNF144AP50876 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF144AP50876 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 CLUHP2-201ENST00000426660 1303 ntBASIC13.78□□□□□ -0.2
RNF144AP50876 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF144AP50876 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNF144AP50876 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF144AP50876 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF144AP50876 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.77□□□□□ -0.2
RNF144AP50876 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF144AP50876 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RNF144AP50876 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF144AP50876 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF144AP50876 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.77□□□□□ -0.21
RNF144AP50876 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF144AP50876 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RNF144AP50876 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF144AP50876 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF144AP50876 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF144AP50876 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 AL355864.2-201ENST00000447420 863 ntBASIC13.77□□□□□ -0.21
RNF144AP50876 AC007389.4-201ENST00000454674 793 ntBASIC13.77□□□□□ -0.21
RNF144AP50876 AL391280.1-201ENST00000506969 1062 ntBASIC13.77□□□□□ -0.21
RNF144AP50876 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF144AP50876 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
RNF144AP50876 GNRHR2-203ENST00000581100 1187 ntBASIC13.77□□□□□ -0.21
RNF144AP50876 AL138709.1-201ENST00000614840 1693 ntBASIC13.77□□□□□ -0.21
RNF144AP50876 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 AC009093.2-202ENST00000620513 2079 ntBASIC13.77□□□□□ -0.21
RNF144AP50876 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF144AP50876 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF144AP50876 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF144AP50876 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF144AP50876 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 AC003102.2-201ENST00000589195 1469 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RNF144AP50876 AL136172.1-201ENST00000598590 1394 ntBASIC13.76□□□□□ -0.21
RNF144AP50876 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RNF144AP50876 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF144AP50876 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms