Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LINC02145-202ENST00000507444 2419 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 KRT8P8-201ENST00000434750 1448 ntBASIC9.57□□□□□ -0.88
PCP4P48539 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 CICP27-201ENST00000442987 3812 ntBASIC9.57□□□□□ -0.88
PCP4P48539 BX276092.7-203ENST00000637198 1536 ntBASIC9.57□□□□□ -0.88
PCP4P48539 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
PCP4P48539 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 AL683813.1-201ENST00000435597 3018 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 AC005537.1-203ENST00000629291 1748 ntTSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 KLHL30-AS1-201ENST00000623136 3106 ntBASIC9.57□□□□□ -0.88
PCP4P48539 AL645504.1-201ENST00000429443 1809 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 RBM44-202ENST00000409864 3449 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 ACTG1P9-201ENST00000457622 2658 ntBASIC9.57□□□□□ -0.88
PCP4P48539 HSPA8P9-201ENST00000485881 1943 ntBASIC9.57□□□□□ -0.88
PCP4P48539 AL450306.1-201ENST00000434097 2028 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
PCP4P48539 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
PCP4P48539 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 AC022447.6-201ENST00000515522 438 ntBASIC9.57□□□□□ -0.88
PCP4P48539 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 CHST11-202ENST00000546689 756 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 TRMT112P6-201ENST00000599234 372 ntBASIC9.57□□□□□ -0.88
PCP4P48539 SLC4A1AP-204ENST00000613058 2966 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 NCOA6-201ENST00000359003 7081 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 ADH6-201ENST00000237653 1691 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 PIGO-203ENST00000378617 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 FITM2-201ENST00000396825 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
PCP4P48539 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 EEF2KMT-202ENST00000458008 2268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 BLACAT1-201ENST00000626538 2994 ntBASIC9.57□□□□□ -0.88
PCP4P48539 LINC01483-201ENST00000433856 3085 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
PCP4P48539 AC137932.3-201ENST00000602042 3660 ntTSL 2 BASIC9.57□□□□□ -0.88
PCP4P48539 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 PCDHGB4-201ENST00000519479 4578 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 KCTD21-AS1-207ENST00000600795 1549 ntBASIC9.56□□□□□ -0.88
PCP4P48539 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 FBXO25-201ENST00000276326 2104 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 KARS-202ENST00000319410 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 TTI2-206ENST00000613904 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 RCVRN-201ENST00000226193 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 AL162274.3-201ENST00000623138 3109 ntBASIC9.56□□□□□ -0.88
PCP4P48539 AC011511.5-201ENST00000589379 3219 ntBASIC9.56□□□□□ -0.88
PCP4P48539 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 CSF2RB-201ENST00000262825 4087 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 CHRM1-201ENST00000306960 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 SPOP-202ENST00000393328 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 AL162615.1-201ENST00000429893 1653 ntBASIC9.56□□□□□ -0.88
PCP4P48539 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 POTEF-202ENST00000409914 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC9.56□□□□□ -0.88
PCP4P48539 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC9.56□□□□□ -0.88
PCP4P48539 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 TRIM29-201ENST00000341846 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 REXO5-202ENST00000348433 2604 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 SUFU-203ENST00000423559 2601 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 CHST4-201ENST00000338482 2412 ntAPPRIS P1 TSL 4 BASIC9.56□□□□□ -0.88
PCP4P48539 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 FBXL19-AS1-201ENST00000563777 3951 ntBASIC9.56□□□□□ -0.88
PCP4P48539 KRT80-201ENST00000313234 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms