Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SHMT1P1-201ENST00000419974 1312 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 LINC00115-201ENST00000473798 1317 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TM4SF4P48230 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 AL121949.3-201ENST00000406684 385 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.29■□□□□ 0.2
TM4SF4P48230 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 AL773545.2-201ENST00000442149 472 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 AC011431.1-201ENST00000512971 230 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 AP000920.1-201ENST00000531824 344 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TM4SF4P48230 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.29■□□□□ 0.2
TM4SF4P48230 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TM4SF4P48230 AC113385.2-201ENST00000614465 762 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
TM4SF4P48230 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 PCDHA1-201ENST00000378133 2726 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TM4SF4P48230 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TM4SF4P48230 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.28■□□□□ 0.2
TM4SF4P48230 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.28■□□□□ 0.2
TM4SF4P48230 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TM4SF4P48230 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 RPL3P2-204ENST00000413027 1203 ntBASIC16.28■□□□□ 0.2
TM4SF4P48230 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.28■□□□□ 0.2
TM4SF4P48230 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.28■□□□□ 0.2
TM4SF4P48230 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 AC132825.4-202ENST00000578792 434 ntBASIC16.28■□□□□ 0.2
TM4SF4P48230 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.28■□□□□ 0.2
TM4SF4P48230 MIR6125-201ENST00000618986 96 ntBASIC16.28■□□□□ 0.2
TM4SF4P48230 AC048382.6-201ENST00000621980 1223 ntBASIC16.28■□□□□ 0.2
TM4SF4P48230 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 TBC1D27-202ENST00000424239 1573 ntBASIC16.28■□□□□ 0.2
TM4SF4P48230 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 KRT8P43-201ENST00000406052 1458 ntBASIC16.28■□□□□ 0.2
TM4SF4P48230 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.28■□□□□ 0.2
TM4SF4P48230 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TM4SF4P48230 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TM4SF4P48230 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM4SF4P48230 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.27■□□□□ 0.2
TM4SF4P48230 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM4SF4P48230 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM4SF4P48230 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TM4SF4P48230 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.27■□□□□ 0.2
TM4SF4P48230 GGTLC4P-201ENST00000402176 664 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 ACTBP14-201ENST00000411655 1089 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC16.27■□□□□ 0.2
TM4SF4P48230 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC16.27■□□□□ 0.2
TM4SF4P48230 AC108724.1-201ENST00000481669 352 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 ALG1L15P-201ENST00000482834 794 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.27■□□□□ 0.2
TM4SF4P48230 GOLGA2P8-201ENST00000505201 779 ntBASIC16.27■□□□□ 0.2
TM4SF4P48230 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC16.27■□□□□ 0.2
TM4SF4P48230 ACY3-202ENST00000529256 933 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms