Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
SOX11P35716 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX11P35716 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SOX11P35716 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SOX11P35716 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX11P35716 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 GHSR-202ENST00000427970 912 ntBASIC14.53□□□□□ -0.08
SOX11P35716 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX11P35716 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX11P35716 USP32P1-208ENST00000506594 1164 ntBASIC14.53□□□□□ -0.08
SOX11P35716 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.53□□□□□ -0.08
SOX11P35716 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX11P35716 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.53□□□□□ -0.08
SOX11P35716 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX11P35716 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX11P35716 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX11P35716 AC133539.2-201ENST00000604757 467 ntBASIC14.53□□□□□ -0.08
SOX11P35716 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 AC006213.4-201ENST00000616184 634 ntBASIC14.53□□□□□ -0.08
SOX11P35716 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.53□□□□□ -0.08
SOX11P35716 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SOX11P35716 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SOX11P35716 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX11P35716 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX11P35716 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SOX11P35716 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.52□□□□□ -0.08
SOX11P35716 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.52□□□□□ -0.08
SOX11P35716 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.52□□□□□ -0.08
SOX11P35716 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.52□□□□□ -0.08
SOX11P35716 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
SOX11P35716 KRT8P22-201ENST00000562317 1415 ntBASIC14.52□□□□□ -0.08
SOX11P35716 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.52□□□□□ -0.08
SOX11P35716 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX11P35716 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SOX11P35716 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX11P35716 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.52□□□□□ -0.09
SOX11P35716 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.52□□□□□ -0.09
SOX11P35716 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX11P35716 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
SOX11P35716 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX11P35716 KATNBL1P4-201ENST00000503545 918 ntBASIC14.52□□□□□ -0.09
SOX11P35716 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.52□□□□□ -0.09
SOX11P35716 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX11P35716 COA4-204ENST00000541455 1038 ntTSL 5 BASIC14.52□□□□□ -0.09
SOX11P35716 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX11P35716 AL359711.2-201ENST00000563105 872 ntBASIC14.52□□□□□ -0.09
SOX11P35716 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX11P35716 CU634019.7-201ENST00000624153 1185 ntBASIC14.52□□□□□ -0.09
SOX11P35716 FP236241.2-201ENST00000624906 1185 ntBASIC14.52□□□□□ -0.09
SOX11P35716 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 DMBT1P1-203ENST00000636837 4628 ntBASIC14.52□□□□□ -0.09
SOX11P35716 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.52□□□□□ -0.09
SOX11P35716 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
SOX11P35716 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX11P35716 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SOX11P35716 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX11P35716 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX11P35716 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.52□□□□□ -0.09
SOX11P35716 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SOX11P35716 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX11P35716 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX11P35716 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX11P35716 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX11P35716 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms