Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 AC067750.1-201ENST00000608826 6545 ntBASIC13.21□□□□□ -0.29
HLA-DOBP13765 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 AC112492.5-201ENST00000421897 457 ntBASIC13.21□□□□□ -0.29
HLA-DOBP13765 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 COX5BP1-201ENST00000507622 393 ntBASIC13.21□□□□□ -0.29
HLA-DOBP13765 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 KRT17P8-201ENST00000540749 863 ntBASIC13.21□□□□□ -0.29
HLA-DOBP13765 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.21□□□□□ -0.3
HLA-DOBP13765 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HLA-DOBP13765 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
HLA-DOBP13765 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HLA-DOBP13765 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
HLA-DOBP13765 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
HLA-DOBP13765 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.21□□□□□ -0.3
HLA-DOBP13765 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
HLA-DOBP13765 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AC011498.7-201ENST00000624986 2027 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AC005034.1-201ENST00000426657 489 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 U91328.1-201ENST00000437528 223 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 RPL7P3-201ENST00000441388 714 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 PUDPP3-201ENST00000445368 636 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms