Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB1P11230 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB1P11230 AC013726.1-201ENST00000563747 2285 ntBASIC14.89□□□□□ -0.03
CHRNB1P11230 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 RNA5SP359-201ENST00000364838 113 ntBASIC14.88□□□□□ -0.03
CHRNB1P11230 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNB1P11230 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNB1P11230 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNB1P11230 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNB1P11230 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 AC025262.2-201ENST00000623975 1056 ntBASIC14.88□□□□□ -0.03
CHRNB1P11230 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNB1P11230 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB1P11230 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB1P11230 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB1P11230 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRNB1P11230 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNB1P11230 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNB1P11230 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNB1P11230 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB1P11230 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 FTH1P22-201ENST00000456305 520 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.87□□□□□ -0.03
CHRNB1P11230 RN7SL81P-201ENST00000493781 261 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 AC114947.1-202ENST00000514136 344 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 TMCO5B-205ENST00000530020 894 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.87□□□□□ -0.03
CHRNB1P11230 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 AC084781.1-201ENST00000613737 656 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRNB1P11230 AC127024.7-201ENST00000625101 200 ntBASIC14.87□□□□□ -0.03
CHRNB1P11230 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB1P11230 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms