Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 AC190387.1-201ENST00000551683 408 ntBASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 WASH4P-201ENST00000564273 1246 ntBASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HNRNPCL4P0DMR1 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 AC005840.4-201ENST00000541242 2494 ntBASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 KHSRPP1-201ENST00000427983 1768 ntBASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HNRNPCL4P0DMR1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HNRNPCL4P0DMR1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 MSTO2P-201ENST00000314835 1709 ntBASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HNRNPCL4P0DMR1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms