Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 KRT90P-201ENST00000549264 1064 ntBASIC14.57□□□□□ -0.08
CAPN1P07384 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.57□□□□□ -0.08
CAPN1P07384 DUX4L47-201ENST00000566374 394 ntBASIC14.57□□□□□ -0.08
CAPN1P07384 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.57□□□□□ -0.08
CAPN1P07384 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CAPN1P07384 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.57□□□□□ -0.08
CAPN1P07384 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CAPN1P07384 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CAPN1P07384 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CAPN1P07384 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.56□□□□□ -0.08
CAPN1P07384 MIR1908-201ENST00000410394 80 ntBASIC14.56□□□□□ -0.08
CAPN1P07384 CNN2P8-201ENST00000421872 913 ntBASIC14.56□□□□□ -0.08
CAPN1P07384 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
CAPN1P07384 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.56□□□□□ -0.08
CAPN1P07384 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.56□□□□□ -0.08
CAPN1P07384 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.56□□□□□ -0.08
CAPN1P07384 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.56□□□□□ -0.08
CAPN1P07384 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 AP005019.2-201ENST00000615104 511 ntBASIC14.56□□□□□ -0.08
CAPN1P07384 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.56□□□□□ -0.08
CAPN1P07384 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.56□□□□□ -0.08
CAPN1P07384 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.56□□□□□ -0.08
CAPN1P07384 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CAPN1P07384 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.56□□□□□ -0.08
CAPN1P07384 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CAPN1P07384 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.56□□□□□ -0.08
CAPN1P07384 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CAPN1P07384 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms