Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.39□□□□□ -0.43
GAPDHP04406 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.39□□□□□ -0.43
GAPDHP04406 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.39□□□□□ -0.43
GAPDHP04406 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.39□□□□□ -0.43
GAPDHP04406 ELK1P1-201ENST00000485699 580 ntBASIC12.39□□□□□ -0.43
GAPDHP04406 AC124283.3-201ENST00000570869 594 ntBASIC12.39□□□□□ -0.43
GAPDHP04406 AC138761.1-201ENST00000584393 385 ntBASIC12.39□□□□□ -0.43
GAPDHP04406 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.39□□□□□ -0.43
GAPDHP04406 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 AL158070.2-201ENST00000623713 1621 ntBASIC12.39□□□□□ -0.43
GAPDHP04406 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.39□□□□□ -0.43
GAPDHP04406 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.39□□□□□ -0.43
GAPDHP04406 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
GAPDHP04406 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.39□□□□□ -0.43
GAPDHP04406 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 AL360270.3-201ENST00000609118 1348 ntBASIC12.38□□□□□ -0.43
GAPDHP04406 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
GAPDHP04406 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GAPDHP04406 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 CRB3P1-201ENST00000449338 276 ntBASIC12.38□□□□□ -0.43
GAPDHP04406 AC114812.1-204ENST00000449669 728 ntBASIC12.38□□□□□ -0.43
GAPDHP04406 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.38□□□□□ -0.43
GAPDHP04406 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.38□□□□□ -0.43
GAPDHP04406 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.38□□□□□ -0.43
GAPDHP04406 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.38□□□□□ -0.43
GAPDHP04406 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GAPDHP04406 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.38□□□□□ -0.43
GAPDHP04406 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.38□□□□□ -0.43
GAPDHP04406 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
GAPDHP04406 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GAPDHP04406 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GAPDHP04406 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
GAPDHP04406 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAPDHP04406 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GAPDHP04406 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAPDHP04406 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GAPDHP04406 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GAPDHP04406 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAPDHP04406 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAPDHP04406 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
GAPDHP04406 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GAPDHP04406 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
GAPDHP04406 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
GAPDHP04406 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.37□□□□□ -0.43
GAPDHP04406 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
GAPDHP04406 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms