Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 AL353779.1-201ENST00000434793 351 ntBASIC12.52□□□□□ -0.41
CD3DP04234 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.52□□□□□ -0.41
CD3DP04234 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.52□□□□□ -0.41
CD3DP04234 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.52□□□□□ -0.41
CD3DP04234 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CD3DP04234 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
CD3DP04234 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
CD3DP04234 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CD3DP04234 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 AL109936.8-201ENST00000641772 604 ntBASIC12.52□□□□□ -0.41
CD3DP04234 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CD3DP04234 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 TUBB3P1-201ENST00000405796 1332 ntBASIC12.52□□□□□ -0.41
CD3DP04234 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
CD3DP04234 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.52□□□□□ -0.41
CD3DP04234 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD3DP04234 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
CD3DP04234 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CD3DP04234 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 AL122018.1-201ENST00000446607 2310 ntBASIC12.51□□□□□ -0.41
CD3DP04234 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.51□□□□□ -0.41
CD3DP04234 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 AL450487.1-201ENST00000426799 995 ntBASIC12.51□□□□□ -0.41
CD3DP04234 HTR5BP-201ENST00000430851 1154 ntBASIC12.51□□□□□ -0.41
CD3DP04234 MKNK2P1-201ENST00000437526 628 ntBASIC12.51□□□□□ -0.41
CD3DP04234 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.51□□□□□ -0.41
CD3DP04234 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.51□□□□□ -0.41
CD3DP04234 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.51□□□□□ -0.41
CD3DP04234 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.51□□□□□ -0.41
CD3DP04234 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.51□□□□□ -0.41
CD3DP04234 MIR6080-201ENST00000617359 66 ntBASIC12.51□□□□□ -0.41
CD3DP04234 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD3DP04234 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.51□□□□□ -0.41
CD3DP04234 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD3DP04234 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms