Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
CD74P04233 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CD74P04233 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 AL590627.1-203ENST00000421194 1026 ntBASIC12.4□□□□□ -0.42
CD74P04233 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.4□□□□□ -0.42
CD74P04233 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.4□□□□□ -0.42
CD74P04233 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.4□□□□□ -0.42
CD74P04233 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.4□□□□□ -0.42
CD74P04233 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.4□□□□□ -0.42
CD74P04233 BX640515.1-201ENST00000617215 977 ntBASIC12.4□□□□□ -0.42
CD74P04233 AP001059.3-201ENST00000619053 235 ntBASIC12.4□□□□□ -0.42
CD74P04233 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD74P04233 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
CD74P04233 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD74P04233 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.4□□□□□ -0.43
CD74P04233 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
CD74P04233 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD74P04233 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CD74P04233 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.39□□□□□ -0.43
CD74P04233 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.39□□□□□ -0.43
CD74P04233 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.39□□□□□ -0.43
CD74P04233 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.39□□□□□ -0.43
CD74P04233 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CD74P04233 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.39□□□□□ -0.43
CD74P04233 AL391647.1-201ENST00000395664 511 ntBASIC12.39□□□□□ -0.43
CD74P04233 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 CEND1P1-201ENST00000451006 455 ntBASIC12.39□□□□□ -0.43
CD74P04233 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.39□□□□□ -0.43
CD74P04233 AC022616.1-201ENST00000518688 554 ntBASIC12.39□□□□□ -0.43
CD74P04233 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.39□□□□□ -0.43
CD74P04233 TIMM17BP1-201ENST00000545713 516 ntBASIC12.39□□□□□ -0.43
CD74P04233 AC138761.1-201ENST00000584393 385 ntBASIC12.39□□□□□ -0.43
CD74P04233 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 MTDHP5-201ENST00000598980 586 ntBASIC12.39□□□□□ -0.43
CD74P04233 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.39□□□□□ -0.43
CD74P04233 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.39□□□□□ -0.43
CD74P04233 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 AC139712.1-201ENST00000378256 1875 ntBASIC12.39□□□□□ -0.43
CD74P04233 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.39□□□□□ -0.43
CD74P04233 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.39□□□□□ -0.43
CD74P04233 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CD74P04233 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
CD74P04233 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.39□□□□□ -0.43
CD74P04233 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 AL365181.3-201ENST00000605886 3222 ntBASIC12.39□□□□□ -0.43
CD74P04233 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD74P04233 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms