Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 MIR326-201ENST00000362220 95 ntBASIC13.16□□□□□ -0.3
CNOT4O95628 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.16□□□□□ -0.3
CNOT4O95628 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.16□□□□□ -0.3
CNOT4O95628 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.16□□□□□ -0.3
CNOT4O95628 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.16□□□□□ -0.3
CNOT4O95628 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.16□□□□□ -0.3
CNOT4O95628 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.16□□□□□ -0.3
CNOT4O95628 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.16□□□□□ -0.3
CNOT4O95628 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CNOT4O95628 FAM86HP-204ENST00000513466 959 ntBASIC13.16□□□□□ -0.3
CNOT4O95628 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 AP003171.2-201ENST00000528208 925 ntBASIC13.16□□□□□ -0.3
CNOT4O95628 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CNOT4O95628 RHOQP1-201ENST00000555758 579 ntBASIC13.16□□□□□ -0.3
CNOT4O95628 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.16□□□□□ -0.3
CNOT4O95628 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.16□□□□□ -0.3
CNOT4O95628 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.16□□□□□ -0.3
CNOT4O95628 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.16□□□□□ -0.3
CNOT4O95628 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CNOT4O95628 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.16□□□□□ -0.3
CNOT4O95628 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 AL023775.1-201ENST00000454907 1746 ntBASIC13.16□□□□□ -0.3
CNOT4O95628 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.16□□□□□ -0.3
CNOT4O95628 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.16□□□□□ -0.3
CNOT4O95628 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CNOT4O95628 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.15□□□□□ -0.3
CNOT4O95628 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.15□□□□□ -0.3
CNOT4O95628 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.15□□□□□ -0.3
CNOT4O95628 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CNOT4O95628 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 SALL4P5-201ENST00000419001 1760 ntBASIC13.15□□□□□ -0.3
CNOT4O95628 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 RN7SKP230-201ENST00000365642 335 ntBASIC13.15□□□□□ -0.3
CNOT4O95628 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 MTX1P1-201ENST00000440904 838 ntBASIC13.15□□□□□ -0.3
CNOT4O95628 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.15□□□□□ -0.3
CNOT4O95628 AP006547.1-201ENST00000563435 692 ntBASIC13.15□□□□□ -0.3
CNOT4O95628 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.15□□□□□ -0.3
CNOT4O95628 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 AC002472.3-201ENST00000640124 621 ntBASIC13.15□□□□□ -0.3
CNOT4O95628 SNX18-202ENST00000343017 3140 ntBASIC13.15□□□□□ -0.3
CNOT4O95628 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.15□□□□□ -0.3
CNOT4O95628 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.15□□□□□ -0.3
CNOT4O95628 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CNOT4O95628 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.15□□□□□ -0.3
CNOT4O95628 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CNOT4O95628 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CNOT4O95628 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 AGAP7P-201ENST00000582299 2062 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms