Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL512310.5-201ENST00000551999 515 ntBASIC18.88■□□□□ 0.61
LTN1O94822 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LTN1O94822 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 SHMT1P1-201ENST00000419974 1312 ntBASIC18.88■□□□□ 0.61
LTN1O94822 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC18.88■□□□□ 0.61
LTN1O94822 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.88■□□□□ 0.61
LTN1O94822 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.88■□□□□ 0.61
LTN1O94822 RN7SKP155-201ENST00000516031 288 ntBASIC18.88■□□□□ 0.61
LTN1O94822 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 PEBP1P2-201ENST00000603980 558 ntBASIC18.88■□□□□ 0.61
LTN1O94822 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LTN1O94822 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC18.88■□□□□ 0.61
LTN1O94822 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.88■□□□□ 0.61
LTN1O94822 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LTN1O94822 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LTN1O94822 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.87■□□□□ 0.61
LTN1O94822 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.87■□□□□ 0.61
LTN1O94822 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.87■□□□□ 0.61
LTN1O94822 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.87■□□□□ 0.61
LTN1O94822 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.87■□□□□ 0.61
LTN1O94822 PTGER4P2-201ENST00000328411 252 ntBASIC18.87■□□□□ 0.61
LTN1O94822 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LTN1O94822 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.87■□□□□ 0.61
LTN1O94822 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 PTGER4P3-201ENST00000458150 252 ntBASIC18.87■□□□□ 0.61
LTN1O94822 AC092862.1-201ENST00000541534 533 ntBASIC18.87■□□□□ 0.61
LTN1O94822 DLK1-205ENST00000556051 469 ntTSL 2 BASIC18.87■□□□□ 0.61
LTN1O94822 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC18.87■□□□□ 0.61
LTN1O94822 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.87■□□□□ 0.61
LTN1O94822 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 AC023824.1-201ENST00000562945 2975 ntBASIC18.87■□□□□ 0.61
LTN1O94822 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LTN1O94822 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LTN1O94822 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.86■□□□□ 0.61
LTN1O94822 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.86■□□□□ 0.61
LTN1O94822 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.86■□□□□ 0.61
LTN1O94822 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.86■□□□□ 0.61
LTN1O94822 AC027139.1-201ENST00000565286 951 ntBASIC18.86■□□□□ 0.61
LTN1O94822 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC18.86■□□□□ 0.61
LTN1O94822 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.86■□□□□ 0.61
LTN1O94822 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms